package biotk
Bioinformatics toolkit
Install
Dune Dependency
Authors
Maintainers
Sources
biotk-0.2.0.tbz
sha256=150bdb563e4c9ab69237a02639c90a809fcb075e04fe90ac3ef3ef369a5cbfb0
sha512=ba94c20ffdbbf486867463e29dba18bee2005294c6a6bf49bb96b86cb62f7f6ec213607b2c1870fb6242fe23f76035db5a381e745ca0cc99cd2ee1236285e20d
Description
biotk implements various functionalities in computational biology, like parsers/unparsers for some file formats, a few basic data structures and sequence algorithms, as well as access to some databases.
Published: 13 Feb 2023
README
Biotoolkit library
biotk implements various functionalities in computational biology, like parsers/unparsers for some file formats, a few basic data structures and sequence algorithms, as well as access to some databases.
Installation
Latest release
opam install biotk
Latest commit
opam pin add -y biotk https://github.com/pveber/biotk.git
Dependencies (21)
-
zlib
>= "0.6" -
tyxml
>= "4.4.0" - vg
-
uri
>= "4.2.0" -
rresult
>= "0.6.0" -
result
>= "1.5" - ppx_deriving
- ppx_csv_conv
- otfm
-
ocaml
>= "4.13.0" - gsl
- fmt
-
crunch
>= "3.2.0" -
core_unix
>= "v0.15.0" -
core_kernel
>= "v0.15.0" -
core
>= "v0.15.0" & < "v0.16.0" -
camlzip
>= "1.05" - binning
-
angstrom-unix
>= "0.15.0" -
angstrom
>= "0.15.0" -
dune
>= "2.7"
Dev Dependencies (2)
-
odoc
with-doc -
core_bench
with-test
Used by (2)
- bistro-bio
-
phylogenetics
>= "0.2.0"
Conflicts
None